PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.M01737.1.p
Common NameMIMGU_mgv1a007828mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family WRKY
Protein Properties Length: 395aa    MW: 43090.2 Da    PI: 6.51
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.M01737.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.41.9e-30192250259
                       --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                       +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed++v+++tYeg+H h+
  Migut.M01737.1.p 192 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCAEDQSVLITTYEGRHSHP 250
                       7***************************99****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.3E-33176252IPR003657WRKY domain
SuperFamilySSF1182907.98E-28184252IPR003657WRKY domain
PROSITE profilePS5081129.792186252IPR003657WRKY domain
SMARTSM007747.3E-37191251IPR003657WRKY domain
PfamPF031067.4E-27193250IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 395 aa     Download sequence    Send to blast
MGFDGIIMEN AAFDHGEKRV IYEMDFFADK NDGTSNVEMF DAAETEQENH QQHINTGLNL  60
LTTNTSVIDK PKVDTTNRSP NSEFVLLMKA ELDRVNTENE RLRETLNQAN DKYHSLKMHI  120
ISLLHHKQNP NDEAPNKSEH HHKKKIGAES PEKMVEPETD PEKDVDRHKA AEAVMKKARV  180
SVRARSEAQM ISDGCQWRKY GQKMAKGNPC PRAYYRCTMA AGCPVRKQVQ RCAEDQSVLI  240
TTYEGRHSHP LPPAAMAMAS TTAAAATTLL SGSMTSADGL LMHNSINVPP YYSQNLATIS  300
ASAPFPTITL DLTNNNPASA STAAPQPMFH APFQSHQTQE IMNAATAAAI AADPNFSAAL  360
AAAISSIIGS ARANSDGSDD RISSPESNMR DIGK*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-23178254176WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012848923.10.0PREDICTED: UPF0505 protein C16orf62 homolog isoform X2
SwissprotQ9XEC33e-84WRK42_ARATH; Probable WRKY transcription factor 42
TrEMBLA0A022QHC80.0A0A022QHC8_ERYGU; Uncharacterized protein
STRINGGLYMA08G43258.13e-91(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA9452492
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62300.14e-62WRKY family protein